Xiao-yong Li
Staff Scientist
Eisen Lab Publications:
Li, X-Y, Thomas, S., Sabo, P.J., Eisen, M.B., Stamatoyannopoulos. J.A., and Biggin, M.D.. (2011) The Role of Chromatin Accessibility in Directing the Widespread, Overlapping Patterns of Drosophila Transcription Factor Binding. Genome Biology 12, R34
Thomas, S., Li, X.-Y., Sabo, P.J., Sandstrom, R., Thurman, R., Canfield, T.K, Giste, E., Fisher, W., Hammonds, A., Celniker, S.E., Eisen, M.B., Biggin, M.D., and Stamatoyannopoulos, J.A.. (2011) Dynamic reprogramming of chromatin accessibility during Drosophila embryo development. Genome Biology 12, R43
Harrisson MM, Li X-Y, Kaplan T, Botchan MR, Eisen MB. (2011) Zelda Binding in the Early Drosophila melanogaster Embryo Marks Regions Subsequently Activated at the Maternal-to-Zygotic Transition. PLoS Genet 7(10): e1002266. doi:10.1371/journal.pgen.1002266
Harrison, M.M., Li, X.-Y., Kaplan, T., Botchan M.R., and Eisen M.B.. (2011) Zelda Binding in the Early Drosophila melanogaster Embryo Marks Regions Subsequently Activated at the Maternal-to-Zygotic Transition. PLoS Genet 7(10): e1002266. doi:10.1371/journal.pgen.1002266
Kaplan T, Li X-Y, Sabo PJ, Thomas S, Stamatoyannopoulos JA, Biggin MD, Eisen MB. (2011) Quantitative Models of the Mechanisms That Control Genome-Wide Patterns of Transcription Factor Binding during Early Drosophila Development. PLoS Genet 7(2): e1001290. doi:10.1371/journal.pgen.1001290
Bradley RK, Li XY, Trapnell C, Davidson S, Pachter L, Chu HC, Tonkin LA, Biggin MD, Eisen MB. (2010) Binding site turnover produces pervasive quantitative changes in transcription factor binding between closely related Drosophila species. PLoS Biol. 2010 Mar 23;8(3):e1000343